Publications of 2009
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Lindert, S., Stewart, P. L., Meiler, J.
Hybrid approaches: applying computational methods in cryo-electron microscopy
Curr Opin Struct Biol
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Katherine Fallen, Sreedatta Banerjee, Jonathan Sheehan, Daniel Addison, L. Michelle Lewis, Jens Meiler, and Jerod S. Denton
The Kir channel immunoglobulin domain is essential for Kir1.1 (ROMK) thermodynamic stability, trafficking and gating
Landes Bioscience
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Lindert, S., Staritzbichler, R.; Woetzel, N.; Karakas, M.; Stewart, P. L.; Meiler, J.
EM-fold: De novo folding of alpha-helical proteins guided by intermediate-resolution electron microscopy density maps
Structure
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Gregory D. Friedland, Nils-Alexander Lakomek, Christian Griesinger, Jens Meiler, Tanja Kortemme
A Correspondence Between Solution-State Dynamics of an Individual Protein and the Sequence and Conformational Diversity of its Family
PLOS Computational Biology
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Stepanovic SZ, Potet F, Petersen CI, Smith JA, Meiler J, Balser JR, Kupershmidt S
The evolutionarily conserved residue A653 plays a key role in HERG channel closing
J. Physiology
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Christophe Fares, Nils-Alexander Lakomek, Korvin F. A. Walter, Benedikt T. C. Frank, Jens Meiler, Stefan Becker, Christian Griesinger
Accessing ns-μs side chain dynamics in ubiquitin with methyl RDCs
J. Biomol. NMR
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Kaufmann, K. W., Dawson, E. S.; Henry, L. K.; Field, J. R.; Blakely, R. D.; Meiler, J.
Structural determinants of species-selective substrate recognition in human and Drosophila serotonin transporters revealed through computational docking studies
Proteins
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Julia Koehler, Nils Woetzel, Rene Staritzbichler, Charles R. Sanders, and Jens Meiler
A unified hydrophobicity scale for multispan membrane proteins
Proteins
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Julia Koehler, Ralf Mueller and Jens Meiler
Improved prediction of trans-membrane spans in proteins using an Artificial Neural Network
Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), IEEE Symposium
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Durham, E., Dorr, B., Woetzel, N., Staritzbichler, R., Meiler, J.
Solvent accessible surface area approximations for rapid and accurate protein structure prediction
J. Mol. Model.
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Koehler, J., Mueller, R., Meiler, J.
Improved prediction of trans-membrane spans in proteins using an Artificial Neural Network (best overall student paper in IEEE symposium)
In IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology; Wiese
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Butkiewicz, M., Mueller, R., Selic, D., Dawson, E., Meiler, J.
Application of Machine Learning Approaches on Quantitative Structure Activity Relationships (best student paper in IEEE symposium in CIBCB)
In IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology; Wiese