Below are the updated tutorials from the Rosetta Workshop, held in March 2011 at Vanderbilt University. These tutorials are based on the Rosetta 3.2.1 release version. These tutorials were covered during a 2-day hands-on workshop which included PowerPoint presentations of each topic and step-by-step instructions on working examples for ab initio folding, comparative modeling, loop building, clustering, ligand docking and protein docking.
Introduction to Rosetta:
Topic 1: Rosetta Energy Function
- Presentation (pdf)
- Presenter: Steven Combs
Topic 2: Is this Model Good ?
- Presentation (pdf)
- Presenter: Steven Combs
Topic 3: Preparing Your Structure
- Presentation (pdf)
- Presenter: Steven Combs
Topic 4: Common File Formats in Rosetta
- Presentation (pdf)
- Presenter: Steven Combs
Topic 5: Your Rosetta First Application
- Presentation (pdf)
- Presenter: Steven Combs
Rosetta Application Tutorials:
Tutorial 1: Folding
- Presentation (pdf)
- Tutorials (pdf)
- Presenter: Stephanie Hirst
Tutorial 2: Rosetta Ligand-Docking
- Tutorials (pdf)
- Presenter: Gordon Lemmon
Tutorial 3: Comparative Modeling, Loop Building and Clustering
- Presentation (pdf)
- Tutorials (pdf)
- Presenter: Liz Dong
Tutorial 4: Protein-Protein Docking
- Presentation (pdf)
- Tutorials (pdf)
- Presenter: Jordan Willis
Tutorial 5: Rosetta Enzyme Design
- Tutorials (pdf)
- Presenter: Steven Combs